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Quantum Medicine Update July 2005 - © 4-25-05 Paul Yanick, Jr. Ph.D


Soil Based Organisms™: The Ideal Biological Therapy for Immunological Unresponsiveness and Stubborn Fungal Infections that Underlie Dysbiosis
Paul Yanick, Jr., Ph.D –President, American Academy of Quantum Medicine

 

Drug-resistant infections continue to emerge, infecting an increasing number of individuals. Using the amazing powers of the immune system as a therapeutic agent yields the greatest health benefits. Resistant to all natural medicines and drugs, insidious infections can burn out the immune system by forcing it to expend all its energy in endless warfare, making us vulnerable to many serious and life-threatening infections.

    Humans and bacteria have commensal relationships, where neither partner is harmed, or symbiotic relationships, where unique metabolic traits or other benefits are provided. Our gastrointestinal (GI) tract is colonized by a vast community of symbionts and commensals that have important effects on immune function, nutrient processing by extending the processing of undigested food to the benefit of the host, and host defense by limiting colonization of the GI tract by pathogens.

    The GI tract consortium is, however, unique among organs because it contains more cells than the rest of the human body and possesses over 500 different microbial species (most of which have yet to be cultured in vitro). The use of antibiotics, at any time in one’s life, destabilizes the GI tract consortium by eliminating beneficial microbes, opening new niches for colonization by resistant pathogens.

    The intestinal ecosystem is characterized by dynamic and reciprocal interactions among its microflora, epithelium, and immune system. The continuum between symbiosis, commensalism, and pathogenicity affect the potential outcomes of alternative medical treatment. The ultimate therapeutic reduction of the symbiont-host or commensal-host relationship requires the identification of microbial products, produced in host niches that improve the function of our innate immune system and its degree of responsiveness and power against infectious microbes.

    Microbes make enzymes that are used in making hundreds of products (soy sauce, soda, beer, wine, cheese, infant formula, chewing gum, leather goods, paper, laundry detergent, the stone-washed look on blue jeans, etc.). Some even produce powerful antibiotics that the body uses to fight off pathogenic microbes that cause a wide spectrum of many high profile diseases.

    The greatest threat to the immune system involves a growing number of antibiotic-resistant superbugs and mycotic (yeast or fungal) infections that are resistant to homeopathic and phytomedicinal treatment. Mycotic infections are silent and persistent opportunistic infections that stress and over stimulate the immune system to the point of exhaustion, forcing the immune system to expend energy in a battle it can’t win. Since mycotic infections mutate and use their genetic diversity as an advantage to go deeper into the body, they can obstruct vital immunological repair routines.

    Mutagenicity appears to be related to toxic insults from pesticides or compounds that contain heavy metals, leading to an evolved natural resistance to all sorts of anti-fungal compounds and drugs.1-2 When there is mycotic resistance in the gut, it spreads outward fast into the lymph system choking off the immune system even more. Immunological unresponsiveness invites other pathogens, including new mutant strains of food-borne infections that induce inflammation and promote carcinogenesis. If gut dysbiosis remains untreated, the resistant mycotic progeny will get stronger and replace the susceptible ones at the interface of the genotypes.

 

Long-Term Clinical Probiotic Research

    Many practitioners assume that common probiotics with lactobacillus or bifodobacterium strains can eradicate resistant mycotic infections and re-establish gut symbiosis. A diverse group of microbes has been evaluated for such probiotic activity, including many species of the genera Lactobacillus and Bifidobacteria (most abundant in probiotic-containing food products), species of Enterococcus, Saccharomyces, Escherichia, and the and Bacillus species.

    Our research on thousands of patients over the past decade indicates that gut dysbiotic conditions could not be overturned with many of these popular probiotics. Moreover, treatment with many of these strains did not stop recurrent and persistent mycotic stressors in the gut.

    Could it be that our central dogma of gut ecology is flawed? Or, that we are using the wrong microbes to treat dysbiosis? Clearly, the dramatic rise in inflammatory disorders now plaguing mankind is rooted in the gut. Years of clinical trials helped us to realize that super strains of mycotic stressors are the root cause of chronic maldigestion and malnutriton in patients with treatment-resistant disoders.

    Our use of Soil Based Organisms™ (SBOs), specifically bacillus lichenformis, proved to be the turning point in fully being able to re-establish gut symbiosis against common, overlooked and resistant Sporidiobolus strains.3-5 Treatment with bacillus lichenformis in a unique metalloprotein matrix improved the microbial milieu of the gastrointestinal tract dramatically. Thereafter, we observed progressive improvements in the metabolic activities and integrity of the villi cells lining the gut wall which have the dual role of excluding toxic substances and admitting nutrients into the bloodstream. Nutrient deficiencies that previously did not respond to our long-term management efforts seem to respond quickly as intestinal microbes synthesized vitamins, absorbed nutrients, detoxified poisons like mercury, and provided gut-associated immune defenses against pathogenic fungal, bacterial strains, and parasites.

 

    The Missing Link in Re-establishing Gut Symbiosis: Bacillus Lichenformis

   Clinically, the use of a bacillus lichenformis proved to be the only effective way to fully re-establish gut symbiosis against common, overlooked and resistant Sporidiobolus strains.3-5 Bacillus Lichenformis organisms are loaded with biologically active molecules that provide tremendous assistance to the immune system in cleansing the body of unwanted infection and toxins. Since Sporobolomyces causes infections (lymphadenitis) in patients with AIDS, respiratory diseases, dermatitis, cerebral infection, and serious fungal infections, the chemical arsenal of this microbe had to be stabilized and enriched in a synergistic matrix that for its effective performance in the gastrointestinal tract. 6-10

    The amazing response of Bacillus Lichenformis is related to the breadth of action against the selected resistance mechanisms of opportunistic infections by the production of an enzyme-catalyzing substance that kills the fungi. Sporobolomyces has a strong cross-resistance (distinguished from multiple resistance), in which it develops several mechanisms each giving resistance to one or more anti-fungal compounds.11 In our experience, its 20 species seem to have an array of mechanisms to meet any challenges. Even treatment with 600:1 extracts of potent anti-fungal compounds like allicin, oregano oil, and neem oil failed to eradicate this powerful gut pathogen. In addition, no other probiotic or pharmaceutical weapon aimed at it could stop it from weakening the gut mucosa and triggering constant and prolonged inflammation.

    Biological treatment of Sporobolomyces in the gut requires a range of different approaches, including strengthening of the body’s natural defense mechanisms and the application of antagonistic microorganisms and natural antimicrobial substances to restore symbiosis in the gastrointestinal tract. The potential of antagonistic SBO microorganisms holds great promise in eradicating stubborn and deep infections of opportunistic organisms in the gut. Ideally, identifying antagonists with a broad spectrum of activity with added secondary metabolites could well lead to effective control of mycotic infections caused by the overuse and misuse of antibiotics.

    SBOs were chosen based on their ability to succeed via their colonization ability and adaptive nature.12 For example, studies have revealed the presence of a SBO bacterial population living and reproducing inside healthy fruit that are effective against plant diseases in pears and tomatoes.13-14

    The antagonist activity of SBOs can be expressed in a number of ways: the most common are production of metabolites,15 competition with the pathogen for food,16 direct parasitism, and induced resistance associated with reduction of pathogen enzyme activity.17 Moreover, the use of SBOs proven to produce antibodies prevented the appearance of resistance in pathogen strains (antibodies, the sentinels of the immune system are critical to prevent re-infection).18

    One SBO, bacillus subtilis produces iturin, a natural antifungal compound created when it undergoes microbial fermentation.15 A gram-positive, nonpathogenic, spore-forming organism bacillus subtilis is normally found in the soil, and the robustness of spores enables passage across the gastric barrier, where a proportion of spores germinate in the intestines and populate.

 

How SBOs Work and Communicate to Establish Gut Symbiosis

    SBOs communicate with one another by quorum sensing (the emitting and reacting to chemical signals). Quorum sensing enable cells to control gene expression via different signaling themes, variations in the design of extracellular signals, and the biochemical mechanisms of signal relay. Quorum sensing is used by Gram-negative and Gram-positive bacteria to control a variety of physiological functions: virulence, bio-film formation, production of antibiotics, sporulation, and genetic competence for transformation. Studies with mass spectroscopy have identified four compounds used in bacterial signal transduction.22 Studies have shown that some SBOs use pheromones as regulators and help to counteract the toxicity of sporobolomyces which store huge amounts of toxic metals.23,24 Moreover, these SBOs aid the body in the microbial control of heavy metal pollution to prevent neurodegenerative disorders associated with heavy metal toxicity.25-28

    SBOs involve the timely manipulation of antagonist populations to suppress pathogens in various inoculums’ sources29for a total or partial destruction of pathogen populations by other organisms.30 In agriculture, biological antagonisms are expected to become an important part of the control measures against disease. Bacillus subtilus are capable of significant reductions in decay caused by fungi in apples and its endospores are particularly resistant to dehydration and are far more resistant to destruction by toxins than most bacteria.31 Plus, Bacillus subtilis has been demonstrated capable of preventing infection by the yeast Monilinia fructicola for a period of nine days for peach, nectarine, apricots and plums. Similarly, spraying apple leaves with Bacillus subtilis reduced infection by the fungi Nectria galligena.30-32

 

Highlights of Scientific Research with SBOs


    The advantages of using the SBOs (B. subtilis and B. lichenformis)—compounded with metalloprotein37 synergists—over other probiotic species are:

•  Immunomodulation: SBOs provide a deliberate induction of defense reactions in advance of infection that inaugurates biological defenses in symbiosis with the immune system to cleanse the body of unwanted decay (intestinal biofilms or impacted wastes). They have been documented to aggressively consume a high percentage of all pathogens (yeast, fungal, viral, parasitic, bacteria).41-43 SBO-proteinase enzymes are antagonist to serious infections like Listeria monocytogenes.19-21

•  Super Resilience Strains: SBOs in metalloprotein matrixes have fast growth, relatively simple nutritional requirements, and secrete of large amounts of proteins such as the anti-viral protein, alpha-interferon, un-coded antibodies, and other immunological-type weapons or metabolites.35,37

•  Antibody Production: Italian researchers have demonstrated that in vitro and in vivo, SBOs are powerful stimulants of secretory immunoglobulin A, 38-39 and various antibodies of the peptide-lipopeptides of the aminoglycoside group.57-60

•  GALT Enhancement: SBOs survive in the gut environment long enough to promote gut-associated lymphoid tissues (GALT) development which mediates a variety of host immune functions, such as mucosal immunity and oral tolerance.33-36

•  Improved Nourishment: SBOs assist in the digestive process to boost digestive capacity and assimilation of nutrients needed to repair the body from damage induced by stress and prolonged inflammation. They are proven effective in oral bacterial therapy and in bacterio-prophylaxis of gastrointestinal disorders for diarrhea (mostly as a direct result of antibiotic treatment).43-46 The ingestion of significant quantities of B. subtilis restores normal microbial flora following extensive antibiotic use or illness.40-44

•  Improved Urinary Tract Function: Long-term treatment with SBOs decreases the incidence of urinary tract infections in the elderly.42

•  Improved Cell-Mediated Immunity: Improved cell-mediated immune response,49-50 were noted with a decrease in recurrent respiratory infections,50 increased interferon production by stimulated peritoneal and spleen cells.51

•  Anti-tumor Effects: Studies have shown that SBOs produce antibiotics like amicoumacin A (an isocoumarin compound) that exerts both anti-inflammatory and anti-tumoral activities.61-62

•  Improved Digestion via Gastro-duodenal Function: SBOs have anti-H pylori activity to inhibit a common clinical cause of gastritis and duodenitis and produce potent antimicrobial substances (bacteriocins), 52-53 and other biologically active compounds.54-56

 

Summary


    Asthma, allergies, gut permeability and digestive disorders, arthritis and immune disorders are reaching epidemic proportions. Millions rely on painkillers in order to mute the agony of slipped discs, deteriorating joints and prolonged inflammation. The awesome potential of microbe-based therapies with SBOs provides one of the most promising and safe alternatives to drugs or other alternative methods to rid the body of new mutant strains of microbes that induce and promote inflammation and pain.63

The healthy immune system has the ability to unleash its magnificent and diverse arsenal of antimicrobial agents when SBOs are plentiful in the gut. Only one treatment with an antibiotic can cause a sporobolomyces infection to silently persist as it both suppresses and depletes cells involved in the immune response. What could be better than allowing the body’s own immune system to battle the threats of new mutant strains of infections?

   SBOs strengthen innate immunity by boosting nourishment to the cells that mediate the immune response and by cleansing the body of sporobolomyces strains that burrow behind putrefactive and impacted intestinal wastes. New insights gleaned from SBOs are nothing short of breathtaking. Immunomodulation and re-modulation with SBOs that are host defense potentiators and immune potentiators augment the body’s army of immune cells to identify, tag, poison, blast, and consume pathogenic microbes. Clearly, symbiosis is a prerequisite immune patrolling, enforcing, and attacking of invading microbes with greater efficiency.

    New SBO-based technologies provide novel strategies to outwit deadly forms of new emerging viruses and mutant superbugs that pose serious and even lethal threats to the human body. Re-establishing gut symbiosis reduces the stress load on the immune system so it can provide a stronger and more powerful defense against viral infections.

    It is evident that future research endeavors on human gut ecology must employ a multi-disciplinary approach with an integration of microbiology, biochemistry, molecular ecology, environmental science, chemical and environmental engineering, physical chemistry and analytical chemistry. However, as our research revealed, SBOs must be free of immunosuppressive mycotoxins commonly found many cultured probiotics. Mycotoxicosis disrupts liver detoxification functions and can depress cell-mediated immune functions seventy percent.64 In addition, top product toxicity and irradiation, an extensive biochemical, physiological, and phylogenetic analysis of probiotic products reveals that some products are even mislabeled.47-48 Our long-term research has shown that out of 77 bacillus strains only two SBOs were clinically effective. SBOs have been proven safe and are commonly used in the production of antibiotics, amino acids, enzymes, and fermented beans.63

   SBOs help to boost nutrient uptake and detoxify the body and address the number one cause of maldigestion at gastro-duodenal juncture.65-67 SBOs protect the GI mucosa and hold great promise in restoring GI function and GALT-mucosal immune system disorders to create a natural barrier against invading microbes. The result: the mucosal immune system’s repertoire of lymphocytes can do their job at defending the body efficiently with little wasted effort.

NOTE: The metalloprotein matrix of Soil Based Organisms™ (Nature’s Biotics) used in this study was purchased from Life Science Products, Inc by the author. This research was funded by the American Academy of Quantum Medicine, a non-profit organization. The author is neither a paid consultant nor an employee of Life Science Products, Inc.

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